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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs11990446 chr8:8825795 C/G MCPH1 chr8:6264113-6506025:+ 0.86 8.14 5.71E-15 Box Plot
BLCA rs11990446 chr8:8825795 C/G MTMR9 chr8:11141925-11185655:+ 0.67 6.88 2.39E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G NEIL2 chr8:11627148-11644855:+ 0.71 6.57 1.68E-10 Box Plot
BLCA rs11990446 chr8:8825795 C/G PBK chr8:27667137-27695612:- 0.47 5.99 4.8E-9 Box Plot
BLCA rs11990446 chr8:8825795 C/G PCM1 chr8:17780349-17887453:+ 0.66 6.72 6.47E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G PINX1 chr8:10622473-10697394:- 0.59 6.5 2.54E-10 Box Plot
BLCA rs11990446 chr8:8825795 C/G POLR3D chr8:22102617-22112113:+ 0.81 8.24 2.68E-15 Box Plot
BLCA rs11990446 chr8:8825795 C/G PPP2CB chr8:30631973-30671830:- 0.75 7.88 3.33E-14 Box Plot
BLCA rs11990446 chr8:8825795 C/G PPP2R2A chr8:26149007-26230196:+ 0.68 6.81 3.88E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G R3HCC1 chr8:23127633-23153792:+ 0.7 7.33 1.38E-12 Box Plot
BLCA rs11990446 chr8:8825795 C/G TMEM66 chr8:29920528-29939940:- 0.73 7.79 6.29E-14 Box Plot
BLCA rs11990446 chr8:8825795 C/G TNFRSF10A chr8:23047965-23082639:- 0.6 6.71 6.94E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G TRIM35 chr8:27142404-27168836:- 0.69 6.67 8.91E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G UBXN8 chr8:30589764-30624522:+ 0.68 6.81 3.8E-11 Box Plot
BLCA rs11990446 chr8:8825795 C/G VPS37A chr8:17104080-17159936:+ 0.81 8.03 1.24E-14 Box Plot